Subject: Basically a checkbox is stored as
a multiple value text list.
When present in the user interface
marking a checkbox in the list adds a unique value to the list.
unchecking the box removes the corresponding value
(while leaving any other values unaltered)
Now lotus stores all items as multiple value anyway,
so a checkbox maps easily into that paradigm.
all you are really asking is how do I remove one value from a text list without affecting any others 
lets assume:
-
the checkbox field is called CBF
-
the value you wish to remove is “To Go”
then in formula that would be easy
FIELD CBF := @Trim( @Replace( CBF; “To Go” ; “” ) ) ;
Note:
a) the use of at replace to map values using two lists
b) the use of ‘lists’ that map only the target to blank
c) the fact that @Replace leaves other values in the source unchanged
d) the fact that @Replace does nothing if it finds no matches
e) the use of @Trim to remove the resultant blank entry in the list
So far so good - but you asked how to do this in LotusScript NOT Formula.
Well, if you are (relatively) new to Lotus you may not be aware of a powerful LotusScript tool - Evaluate
this allows you to use simple fomula statements in LS
which can sometimes ease complex manipulation of data
(especially those affecting lists)
Lets further aAssume that you have a handle onto the required document e.g.
Dim doc as Notesdocument
set doc = … .
then you can leverage your new formula like this
doc.CBF = Evaluate( {@Trim( @Replace( CBF; “To Go” ; “” ) ) } , doc )
Note here:
i) the use of implied property to assign the result list direct to the item (doc.cbf)
ii) The evaluate function Evaluate( formula string , on document)
iii) the use of { } to delimit the formula (allowing easier use of quotes in the formula)
Hope this helps. as always take a look in designer help for more detail
BTW:
you haven’t said how you are linking the setting of a field to “YES”
with the modification of the checklist
so I cant comment on where or how you would run this script
Let us know how you are doing this
and if you need further help